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5 Results found for "NAMD"

1. Compute Canada Federation National Training: Molecular Dynamics

...have some experience working with the command line. Participants will be guided through AMBER and NAMD software for preparing and performing simulations of biomolecular systems, VMD for visualizing trajectories...

2. ACENET: Molecular Dynamics

...have some experience working with the command line. Participants will be guided through AMBER and NAMD software for preparing and performing simulations of biomolecular systems, VMD for visualizing trajectories...

3. Molecular Dynamics

...working with the command line.Participants will be guided through preparing systems for AMBER and NAMD software and performing simulations of biomolecular systems, VMD for visualizing trajectories and...

4. ACENET: Molecular Dynamics Workshop

...to using various structure prediction software to model missing protein and RNA segments, AMBER and NAMD software for performing simulations of biomolecular systems, VMD for visualizing trajectories...

5. Running Efficient Molecular Dynamics Simulations

...Currently, the database contains over 130 benchmarks for four major MD software packages: AMBER, GROMACS, NAMD and OpenMM. Efforts to test all possible hardware/software combinations are underway. We...